miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|24064216|gb|BU872692.1|BU872692 GGAGGCTTACTCCTCTGCCTATTTATTTTTCAAGCCGGGTCAGATCAAAGCAAAGACGTTCACGCAGCGTCGGATCAGAG
CTAAAAGAGGCAGCGAGCCAGCCCTCAGATATCGTCATCCTCTTTGATTTAAAGCATTTCTTACTGTTTTTATTTTCTCT
GTCCAAGCAAAGATGGCCGATCAGCTGACCGATGACCAGATCTCCGAGTTCAAGGAAGCTTTCAGCCTCTTCGATAAGGA
CGGCGATGGCTGCATTACTACTAAGGAGCTTGGGACTGTGATGCGTTCATTGGGCCAAAACCCAACTGAGGCAGAACTCC
AGGACATGATAAACGAGGTCGATGCTGATGGGAATGGTACCATCGACTTCCCTGAGTTCCTCAACCTCATGGCCCGCAAG
ATGAAGGATACCGATTCTGAGGAGGAGCTCAAGGAAGCTTTCAGAGTTTTTGATAAGGATCAGAATGGCTTCATTTCTGC
TGCTGAGCTGCGCCATGTCATGACAAATCTTGGGGAGAAGCTGACAGATGAGGAGGTTGGTGAGATGATCCGTGAGGCTG
ATGTGGATGGTGATGGTCAGATCAACTACGAAGAATTTGTCAAAGTTATGATGGCCAAGTGAGGTTTACTCACCCAAAAC
CCAAAAACCAATGCATAAAAACAAAAAAGAGAGACAGGGCAAATAAGTTTGATGAGAATTCTATTTCCCAATTAGGACAT
CTTCATTTGATGTTATTAGCTTCA




Most similar to sp|P62201|CALM_LILLO

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
          Length = 149

 Score =  295 bits (755), Expect = 2e-79
 Identities = 148/149 (99%), Positives = 148/149 (99%)
 Frame = +2

Query: 173 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 352
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 353 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 532
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 533 EVGEMIREADVDGDGQINYEEFVKVMMAK 619
           EV EMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149